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Protein Structure Prediction: From Evolutionary Constraints to Generative Modeling

arXiv:2608.16094v1 Announce Type: cross Abstract: Accurate protein structure prediction is fundamental to structural biology because protein structure underlies molecular function and provides a basis for mechanistic interpretation. Recent advances in deep learning have transformed the field from multiple sequence alignment…

Improved Regret Analysis for Parallel Gaussian Process Bandit Optimization

arXiv:2608.16492v1 Announce Type: cross Abstract: This paper studies the regret analysis for parallel Gaussian process (GP) bandit optimization. The known regret upper bounds for the widely used GP batched upper confidence bound and GP batched Thompson sampling (GP-BTS) suffer from…

PIKFNO: An Interpretable Neural Operator Based on Physics Informed Kernel Function

arXiv:2608.14619v1 Announce Type: new Abstract: This work proposes a new interpretable neural operator framework, termed the Physics Informed Kernel Function Neural Operator (PIKFNO), which explicitly incorporates physics informed kernel functions derived from governing equations into the neural operator architecture. Unlike…

Speculative Rollback Correction for Quality-Diverse Web Agent Imitation

arXiv:2606.12485v2 Announce Type: replace Abstract: Training interactive web agents through imitation learning from expert trajectories has emerged as a highly effective approach. However, determining the optimal timing for expert intervention presents a critical challenge in this context. Delayed intervention often…

ShadowNet for Data-Centric Quantum System Learning

arXiv:2308.11290v2 Announce Type: replace-cross Abstract: Understanding the dynamics of large quantum systems is hindered by the curse of dimensionality. Statistical learning offers new possibilities in this regime through neural network protocols and classical shadows, while both methods have limitations: the…

Solvable Sokoban Without a Solver via Diffusion

arXiv:2608.15958v1 Announce Type: cross Abstract: Deciding whether a Sokoban puzzle is solvable is PSPACE-complete (Culberson, 1997): solutions can be exponentially long and there is no short certificate to check. Solvability is also a fragile property, since even a single misplaced…