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Geometric Regularity in Deterministic Sampling Dynamics of Diffusion-based Generative Models

arXiv:2506.10177v3 Announce Type: replace Abstract: Diffusion-based generative models employ stochastic differential equations (SDEs) and their equivalent probability flow ordinary differential equations (ODEs) to establish a smooth transformation between complex high-dimensional data distributions and tractable prior distributions. In this paper, we…

Trustworthy scientific inference with generative models

arXiv:2508.02602v2 Announce Type: replace-cross Abstract: Generative artificial intelligence (AI) excels at producing complex data structures (text, images, videos) by learning patterns from training examples. Across scientific disciplines, researchers are now applying generative models to “inverse problems” to directly predict hidden…

Luxical: High-Speed Lexical-Dense Text Embeddings

arXiv:2512.09015v2 Announce Type: replace-cross Abstract: Frontier language model quality increasingly hinges on our ability to organize web-scale text corpora for training. Today’s dominant tools trade off speed and flexibility: lexical classifiers (e.g., FastText) are fast but limited to producing classification…

Bidirectional Representations Augmented Autoregressive Biological Sequence Generation

arXiv:2510.08169v3 Announce Type: replace Abstract: Autoregressive (AR) models, common in sequence generation, are limited in many biological tasks such as de novo peptide sequencing and protein modeling by their unidirectional nature, failing to capture crucial global bidirectional token dependencies. Non-Autoregressive…

Enhanced Spatial Clustering of Single-Molecule Localizations with Graph Neural Networks

arXiv:2412.00173v2 Announce Type: replace Abstract: Single-molecule localization microscopy generates point clouds corresponding to fluorophore localizations. Spatial cluster identification and analysis of these point clouds are crucial for extracting insights about molecular organization. However, this task becomes challenging in the presence…